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Showing posts with label cell. Show all posts
Showing posts with label cell. Show all posts

Self-Assembly Gets Automated in Reverse of ‘Game of Life’

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Mike's Notes An excellent article from Quanta Magazine. Pipi 9 has some similarities to this. Resources http...

The Vital Question by Nick Lane – a game-changing book about the origins of life

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Mike's Notes Note Resources https://www.theguardian.com/books/2015/apr/22/the-vital-question-nick-lane-review-secret-l...

Markus Covert: How to build a computer model of a cell

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Mike's Notes Another video interview with Marcus Covert. Pipi 6 was built by fusing Pipi with Covert's open-source cell...

Cell Boundaries: Defining the Scope of a Cell in Cell-based Architecture

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Mike's Notes Pipi uses several different novel cell-like structures in its architecture, unlike the one described in this article. Howev...

How to deal with parameters for whole-cell modelling

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Mike's Notes Pipi has thousands of parameters, which make it challenging to finely adjust for desired system-level emergent prop...

WholeCellViz

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Mike's Notes WholeCellViz is a web-based software program for visually analysing whole-cell simulations. Pipi's internal arc...

Markus Covert and Mycoplasma

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Mike's Notes This is part of why I rebuilt Pipi 6 from memory. Resources https://en.wikipedia.org/wiki/Markus_W...
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Scientists Successfully Model a Living Cell with Software

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Mike's Notes This article I read in Scientific American led me to rebuild Pipi. Resources https://www.scientificameric...